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Quantitative Methods

Authors and titles for recent submissions

[ total of 12 entries: 1-12 ]
[ showing up to 25 entries per page: fewer | more ]

Thu, 22 Aug 2019

[1]  arXiv:1908.08010 (cross-list from cs.NE) [pdf, other]
Title: Improving the Results of De novo Peptide Identification via Tandem Mass Spectrometry Using a Genetic Programming-based Scoring Function for Re-ranking Peptide-Spectrum Matches
Comments: 13 pages, conference paper, containing 2 figures
Subjects: Neural and Evolutionary Computing (cs.NE); Quantitative Methods (q-bio.QM)
[2]  arXiv:1908.07847 (cross-list from cs.LG) [pdf]
Title: CUDA optimized Neural Network predicts blood glucose control from quantified joint mobility and anthropometrics
Comments: 5 pages, 6 figures, conference paper: International Conference on Information System and Data Mining, published at this https URL
Subjects: Machine Learning (cs.LG); Quantitative Methods (q-bio.QM); Machine Learning (stat.ML)
[3]  arXiv:1908.07611 (cross-list from q-bio.TO) [pdf]
Title: A physiological model of the inflammatory-thermal-pain-cardiovascular interactions during a pathogen challenge
Subjects: Tissues and Organs (q-bio.TO); Quantitative Methods (q-bio.QM)

Wed, 21 Aug 2019

[4]  arXiv:1908.07209 [pdf, other]
Title: DeepScaffold: a comprehensive tool for scaffold-based de novo drug discovery using deep learning
Comments: Updates to this version 1. It is found that the model architecture described in Section 2.3 corresponds to an older version of our model. Updates are therefore made to this section to reflect the latest model architecture. Figure 5 is also updated accordingly. 2. Section 2.5 is added to improve the clarity of the manuscript. 3. Other minor updates to language and formatting
Subjects: Quantitative Methods (q-bio.QM); Machine Learning (cs.LG)

Tue, 20 Aug 2019

[5]  arXiv:1908.06872 [pdf, other]
Title: A Modified Ising Model of Barabási-Albert Network with Gene-type Spins
Comments: 30 pages, 8 figures, presented in poster form in SBHD'18, LA, USA; as a talk in SIAM CSE'19
Subjects: Quantitative Methods (q-bio.QM); Statistical Mechanics (cond-mat.stat-mech); Biological Physics (physics.bio-ph)
[6]  arXiv:1908.06733 [pdf, other]
Title: Random-effects meta-analysis of phase I dose-finding studies using stochastic process priors
Comments: 23 pages, 6 figures, 7 tables
Subjects: Quantitative Methods (q-bio.QM); Methodology (stat.ME)
[7]  arXiv:1908.06943 (cross-list from eess.IV) [pdf, other]
Title: Resolving challenges in deep learning-based analyses of histopathological images using explanation methods
Subjects: Image and Video Processing (eess.IV); Computer Vision and Pattern Recognition (cs.CV); Quantitative Methods (q-bio.QM)

Mon, 19 Aug 2019

[8]  arXiv:1908.05711 [pdf]
Title: A simulation model for longitudinal HIV viral load and mother-to-child-transmission in pregnant and postpartum women
Subjects: Quantitative Methods (q-bio.QM); Applications (stat.AP)

Thu, 15 Aug 2019

[9]  arXiv:1908.05126 [pdf]
Title: A minimum set of stable blocks for rational design of polypeptide chains Running head: A set of stable blocks for protein rational design
Authors: Alexei Nekrasov (IBCh RAS), Ludmila Alekseeva (IBCh RAS), Rudolf A. Pogosyan (IBCh RAS), Dmitry Dolgikh (IBCh RAS), M.P. Kirpichnikov (IBCh RAS), Alexandre de Brevern (BIGR), Anastasia Anashkina (ISTC)
Journal-ref: Biochimie, Elsevier, 2019, 160, pp.88-92
Subjects: Quantitative Methods (q-bio.QM); Biomolecules (q-bio.BM)
[10]  arXiv:1908.05122 [pdf]
Title: Investigation of the impact of PTMs on the protein backbone conformation
Authors: Pierrick Craveur (BIGR, SCRIPPS), Tarun Narwani (BIGR), Joseph Rebehmed (LAU, BIGR), Alexandre de Brevern (BIGR)
Journal-ref: Amino Acids, Springer Verlag, 2019, 51 (7), pp.1065-1079
Subjects: Quantitative Methods (q-bio.QM); Biomolecules (q-bio.BM)
[11]  arXiv:1908.05120 [pdf]
Title: In silico prediction of protein flexibility with local structure approach
Journal-ref: Biochimie, Elsevier, 2019, 165, pp.150-155
Subjects: Quantitative Methods (q-bio.QM); Biomolecules (q-bio.BM)
[12]  arXiv:1908.04875 [pdf, other]
Title: Multilevel and multifidelity uncertainty quantification for cardiovascular hemodynamics
Subjects: Quantitative Methods (q-bio.QM); Computational Physics (physics.comp-ph); Applications (stat.AP)
[ total of 12 entries: 1-12 ]
[ showing up to 25 entries per page: fewer | more ]

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